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Robert A. Petit III, PhD
Robert A. Petit III, PhD
rpetit3
Bioinformatician studying bacterial genomics and developer of
Bactopia
and
Staphopia
workflows.
Wyoming Public Health Laboratory
Microbiology Laboratories
Cheyenne, WY
robbie.petit@gmail.com
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Bactopia: a Flexible Pipeline for Complete Analysis of Bacterial Genomes
We created Bactopia, built using Nextflow workflow software, to provide efficient comparative genomic analyses for bacterial species or genera. Analysis of 1,664 public Lactobacillus genomes was conducted to demonstrate the usage of Bactopia.
bactopia
lactobacillus
nextflow
resistance
Published
Tue, 04 Aug 2020 00:00:00 +0000
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