Robert A. Petit III, PhD

Robert A. Petit III, PhD rpetit3

Bioinformatician studying bacterial genomics and developer of Bactopia and Staphopia workflows.

Wyoming Public Health Laboratory
Microbiology Laboratories
Cheyenne, WY
robbie.petit@gmail.com
Curriculum Vitae
Resume

Organizations

5 results for staph

Clear filter

Detecting patterns of accessory genome coevolution in Staphylococcus aureus using data from thousands of genomes.
We report a method for detecting coevolving genes from large datasets of bacterial genomes
accessory big data staph Published Fri, 09 Jun 2023 00:00:00 +0000
Development of an amplicon nanopore sequencing strategy for detection of mutations conferring intermediate resistance to vancomycin in Staphylococcus aureus strains
We report direct S. aureus antibiotic resistance genotype inference using rapid nanopore sequencing from clinical samples
amplicon phage staph Published Mon, 23 Jan 2023 00:00:00 +0000
Unsuspected Clonal Spread of Methicillin-Resistant Staphylococcus aureus Causing Bloodstream Infections in Hospitalized Adults Detected Using Whole Genome Sequencing
We report the transmission dynamics of MRSA among hospitalized patients with bloodstream infections.
mrsa staph virulence Published Thu, 15 Dec 2022 00:00:00 +0000
Species-Wide Phylogenomics of the Staphylococcus aureus Agr Operon Revealed Convergent Evolution of Frameshift Mutations
We report species-wide phylogenomics of Staphylococcus aureus Agr operon
agr staph virulence Published Wed, 19 Jan 2022 00:00:00 +0000
Species-Scale Genomic Analysis of Staphylococcus aureus Genes Influencing Phage Host Range and Their Relationships to Virulence and Antibiotic Resistance Genes
We report species-wide phylogenomics of Staphylococcus aureus Agr operon
phage staph virulence Published Tue, 18 Jan 2022 00:00:00 +0000

Robert A. Petit III, PhD rpetit3

Organizations

Detecting patterns of accessory genome coevolution in Staphylococcus aureus using data from thousands of genomes.

Development of an amplicon nanopore sequencing strategy for detection of mutations conferring intermediate resistance to vancomycin in Staphylococcus aureus strains

Unsuspected Clonal Spread of Methicillin-Resistant Staphylococcus aureus Causing Bloodstream Infections in Hospitalized Adults Detected Using Whole Genome Sequencing

Species-Wide Phylogenomics of the Staphylococcus aureus Agr Operon Revealed Convergent Evolution of Frameshift Mutations

Species-Scale Genomic Analysis of Staphylococcus aureus Genes Influencing Phage Host Range and Their Relationships to Virulence and Antibiotic Resistance Genes